| Episodes | Original Air Date | # | |
|---|---|---|---|
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e01_480.jpg | Rainforest Shmainforest | ||
| The boys travel to Costa Rica as part of the "Getting Gay with Kids" choir tour campaigning to save the rainforest. They subsequently get lost. | Apr 7, 1999 | 32 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e02_480.jpg | Spontaneous Combustion | ||
| When South Park citizens start randomly exploding, the mayor enlists the town's only geologist Randy Marsh to find the cause and solution. Stan, Kyle and Cartman reenact the Stations of the Cross. | Apr 14, 1999 | 33 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e03_480.jpg | The Succubus | ||
| When Chef gets engaged, the boys become concerned of his different personality and his evil fiancee. Cartman suffers from vision problems. | Apr 21, 1999 | 34 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e04_480.jpg | Tweek Vs. Craig | ||
| The boys try to instigate a fight between Tweek and Craig. Meanwhile, Mr. Adler the shop teacher is haunted by a recurring dream of his lost love. | Jun 23, 1999 | 35 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e05_480.jpg | Jakovasaurs | ||
| The boys discover a prehistoric creature called a Jakovasaur while camping at Stark's Pond. The town tries to save the species from extinction. | Jun 16, 1999 | 36 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e06_480.jpg | Sexual Harassment Panda | ||
| A giant panda mascot educates the children on sexual harassment. Cartman sues Stan for sexual harassment, which eventually leads to everyone in South Park suing each other. | Jul 7, 1999 | 37 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e07_480.jpg | Cat Orgy | ||
| While all the adults gather at Mr. Mackey's house to watch the meteor shower, Shelly Marsh babysits for Cartman and invites her much-older boyfriend over. Cartman's cat is in heat. | Jul 14, 1999 | 38 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e08_480.jpg | Two Guys Naked in a Hot Tub | ||
| Stan is dragged to Mr. Mackey's meteor shower party and sent down into the basement to play with Pip, Butters and Dougie. Randy and Gerald share an intimate moment in a hot tub. | Jul 21, 1999 | 39 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e09_480.jpg | Jewbilee | ||
| Kyle invites Kenny to join him and Ike at Jewbilee, a camp for Jewish kids, where they summon Moses. Meanwhile, an evil plot to release Haman is at hand. | Jul 28, 1999 | 40 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e10_480.jpg | Chinpokomon | ||
| The boys and their classmates are caught up in the latest fad from Japan called Chinpokomon that contains subliminal propaganda to bring down the American government. | Nov 3, 1999 | 41 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e11_480.jpg | Starvin' Marvin in Space | ||
| Starvin' Marvin returns to South Park with an alien spaceship and enlists Cartman, Stan, Kyle and Kenny's help to seek out a new home for his starving people. | Nov 17, 1999 | 42 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e12_480.jpg | Korn's Groovy Pirate Ghost Mystery | ||
| Korn comes to South Park for a Halloween concert and helps the boys solve a spooky pirate ghost mystery. | Oct 27, 1999 | 43 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e13_480.jpg | Hooked on Monkey Fonics | ||
| To help Cartman win the school spelling bee, Cartman's Mom gives him the Hooked on Monkey Fonics spelling system. | Nov 10, 1999 | 44 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e14_480.jpg | The Red Badge of Gayness | ||
| Cartman has visions of glory as he suits up for the Confederacy in the annual reenactment of a Civil War battle, and leads the drunken rebels to defeat the union. | Nov 24, 1999 | 45 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e15_480.jpg | Mr. Hankey's Christmas Classics | ||
| An extravaganza of holiday songs are performed in unique South Park style, hosted by Mr. Hankey. | Dec 1, 1999 | 46 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e16_480.jpg | Are You There, God? It's Me, Jesus | ||
| People from all over the world start to gather outside Jesus' house waiting for a millennium miracle. | Dec 29, 1999 | 47 | |
| http://southparkstudios.mtvnimages.com/images/south_park/episode_thumbnails/s03e17_480.jpg | World Wide Recorder Concert | ||
| The children of South Park are invited to Arkansas for the "Four Million Child Blow 2000," the first worldwide recorder concert. | Jan 12, 2000 | 48 | |
